ORIGINAL_ARTICLE Contribution of Contaminated Environmental Surfaces to the Transmission of Multidrug-resistant Acinetobacter baumannii in Special Care Units of a Hospital in Tehran, Iran Introduction: Acinetobacter baumannii is one of the major causes of nosocomial infections. We investigated the distribution of A. baumannii among patients and the environment in special care units of a hospital in Tehran, Iran. Methods: Sixty-nine non-duplicate clinical and environmental samples were collected from ICU, Post-ICU, and CCU in EbneSina Hospital (Tehran, Iran) from June 2015 to April 2016. The isolates were identified using standard biochemical tests, and their identity was confirmed by detection of blaoxa51 gene. Susceptibility to 14 antibiotics was determined by disc the diffusion method, and genetic fingerprinting of the isolates was performed by random amplified polymorphic DNA (RAPD-PCR). Results: We recovered 66 A. baumannii isolates, 41 from patients, and 25 from the environment. All isolates from patients were resistant to all tested antibiotics except colistin. Environmental isolates were resistant to piperacillin (100%), tetracycline, piperacillin/tazobactam, beta-lactams and quinolones (86%), and amikacin (81%) but sensitive to colistin. The RAPD-PCR results revealed 35 clusters with 80% similarity. Despite the heterogeneity among the RAPD-PCR profiles, similar patterns were observed among 11 clusters comprising both clinical and environmental isolates. Conclusion: The results of this research suggest that the presence of A. baumannii on environmental surfaces could have played an essential role in the colonization of the hospitalized patients. http://jommid.pasteur.ac.ir/article-1-176-en.pdf 2019-03-18 37 42 10.29252/JoMMID.6.2.3.37 Acinetobacter baumannii RAPD-PCR MDR ICU environmental contamination. Fereshteh Eftekhar f-eftekhar@sbu.ac.ir 1 Shahid Beheshti University AUTHOR https://orcid.org/0000-0002-2441-2582 Nasrin Esmaeeli Torkanpoory nasrin.esmaeilee@gmail.com 2 EbneSina Hospital, Tehran, Iran AUTHOR https://orcid.org/0000-0002-0060-2189
ORIGINAL_ARTICLE Single Nucleotide Polymorphism of the Interferon-γ Gene (IFN-γ +874 T/A) and the Prognosis of Hepatitis B Infection Introduction: Chronic Hepatitis B virus infection is a multifactorial disease with a variety of clinical outcomes. Since interferon-gamma (IFN-γ) is a significant immune factor in antiviral defense, this case-control study aimed to investigate the potential relationship between single nucleotide polymorphism of rs2430561 and hepatitis B infection outcome in a population of Birjand city, eastern Iran. Methods: Blood samples were collected from 60 chronically HBV- infected patients and 60 healthy subjects with the history of HBV infection. Genomic DNA was extracted from whole blood by the salting-out method. The first intron of IFN-γ with a length of 264 bp was amplified by Amplification Refractory Mutation System Polymerase Chain Reaction (ARMS-PCR) followed by sequencing. Results: Our results exhibited a statistically significant difference between patients and control individuals (p-value<0.001). The frequency of the allele A was 73.3% in HBV- infected patients, whereas in controls (individuals with a history of HBV infection) it was 46.7%. Conclusion: A statistically significant relationship was found between the IFN-γ (+874T/A, rs2430561) single nucleotide polymorphism (SNP) and chronic HBV infec­tion in the studied population. The obtained results showed that HBV infected individuals with T allele have less risk of progressing to chronic HBV infection. It also suggests that the homozygous carriers of the A allele are more vulnerable to chronic HBV infection. http://jommid.pasteur.ac.ir/article-1-149-en.pdf 2019-03-18 43 47 10.29252/JoMMID.6.2.3.43 Chronic Hepatitis B Single Nucleotide Polymorphism Interferon-γ (+874T/A) Iran Mohammad Sadegh Naghizadeh msnaghizadeh92@gmail.com 1 Student Research Committee, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0002-7187-3736 Mohsen Naseri naseri_m2003@yahoo.com 2 Cellular and Molecular Research Center, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0003-3100-6344 Mohammad Fereyduni dr.m.fereidouni@gmail.com 3 Cellular and Molecular Research Center, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0002-2576-9452 Masoud Ziaee dr.m.ziaee@gmail.com 4 3Infectious Diseases Research Center, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0003-0218-6833 Abdolghader Tane ghadertane94@gmail.com 5 Student Research Committee, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0003-0719-0591 Hamidreza Safari hamidrezasafari941@gmail.com 6 Student Research Committee, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0002-0840-5833 Neda Mahavar neda.mahavar91@gmail.com 7 Student Research Committee, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0001-6646-9512 Roya Mahdavi royamahdavi1986@gmail.com 8 4Department of Immunology, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0002-0666-070X Gholamreza Anani Sarab ghansa@yahoo.com 9 Cellular and Molecular Research Center, Birjand University of Medical Sciences, Birjand, Iran AUTHOR https://orcid.org/0000-0003-3844-3643
ORIGINAL_ARTICLE Seroprevalence of Q Fever and Brucellosis in Domestic and Imported Cattle of Southeastern Iran Introduction: Q fever and brucellosis caused by Coxiella burnetii and Brucella spp., respectively are among the significant zoonotic infectious diseases worldwide affecting both humans and domestic animals. Iran and its neighboring countries in the east are endemic for these diseases. This study, conducted in 2011-2012, aimed to determine the seroprevalence of Q fever and brucellosis among domestic and imported cattle slaughtered in Zabol city of Sistan and Baluchistan province, eastern Iran. Methods: We collected blood samples from 103 imported and 62 domestic animals. The Sera were separated and examined by an ELISA for the presence of IgG against the two causative agents. Results: The seroprevalence of brucellosis in imported cattle was 0.97%, while none of the domestic animals turned positive. Seroprevalence of Q fever in domestic cattle was 3.23%, whereas all imported cattle were negative. Conclusion: In this study, brucellosis and Q fever exhibited a very low seroprevalence in domestic and imported animals. Further studies on other livestock would provide more information on the status of these diseases in the southeast of Iran. Furthermore, studies on the prevalence of these diseases in border regions and neighboring countries of Sistan and Baluchistan would provide more in-depth insights into these diseases and the possibility of their importation to Iran. http://jommid.pasteur.ac.ir/article-1-175-en.pdf 2019-03-18 48 52 10.29252/JoMMID.6.2.3.48 Q Fever Zoonoses Coxiella burnetii Brucella Iran Ahmad Ghasemi ghasemi1188@gmail.com 1 National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, Kabudar-Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran; Department of Bacteriology, Faculty of Medical science, Tarbiat Modares University, Tehran, Iran; AUTHOR https://orcid.org/0000-0002-6670-003X Mohammad Reza Hajinezhad hajinezhad@gmail.com 2 Department of Basic Science, Veterinary Medicine Faculty, University of Zabol, Zabol, Iran AUTHOR https://orcid.org/0000-0002-3825-4714 Saber Esmaeili DR.SABERESMAEILI@gmail.com 3 National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, Kabudar-Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran; Department of Bacteriology, Faculty of Medical science, Tarbiat Modares University, Tehran, Iran; AUTHOR https://orcid.org/0000-0003-1920-1737 Ehsan Mostafavi mostafaviehsan@gmail.com 4 National Reference Laboratory for Plague, Tularemia and Q Fever, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Akanlu, Kabudar-Ahang, Hamadan, Iran; Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging Infectious Diseases, Pasteur Institute of Iran, Tehran, Iran; AUTHOR https://orcid.org/0000-0002-1997-517X
ORIGINAL_ARTICLE Increased Alkaline Phosphatase Activity in the Somatic Extract of Hydatid Cyst Protoscoleces upon Treatment with Albendazole, an Implication for in vitro Evaluation of Drug Efficiency Introduction: Hydatidosis is an endemic parasitic disease of humans in Iran, and Albendazole (ABZ) is a drug of choice for treatment of this infection. As the Alkaline phosphatase (ALP) is necessary for the metabolism of parasites, this study was aimed to evaluate the effect of ABZ on ALP enzyme activity in hydatid cyst parasite as a marker for drug efficiency. Methods: In the present study, the ALP activity level was estimated in the extracts of the untreated parasite (Hydatid cyst protoscoleces) as well as the ABZ-treated samples with a final concentration of 100 µg. The protein concentration and the protein bands in the extracted samples were analyzed by Bradford and sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) methods, respectively. Results: The results showed that the mean value of the ALP activity level of the treated samples (0.474 U/ml/mg) was significantly higher than that of untreated samples (0.205 U/ml/mg) (P<0.05). SDS-PAGE analysis demonstrated the higher intensity of the 59 kDa protein band in ABZ-treated samples, compared to the untreated sample. Conclusion: Considering the effect of the ABZ drug on ALP activity in the hydatid cyst protoscoleces, this enzyme might be regarded as an indicator for the effectivity of drug on this parasite. http://jommid.pasteur.ac.ir/article-1-167-en.pdf 2019-03-18 53 56 10.29252/JoMMID.6.2.3.53 Albendazole Parasites Alkaline Phosphatase Hydatid cyst Iran Ali Farahnak Farahnak@sina.tums.ac.ir 1 Department of Parasitology and Mycology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran. AUTHOR https://orcid.org/0000-0002-2203-942X Leila Zaki leilazaki1357@gmail.com 2 Department of Parasitology and Mycology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran. AUTHOR https://orcid.org/0000-0003-1284-4449 Mohamad Bagher Molaei Rad molaei@yahoo.com 3 Department of Parasitology and Mycology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran. AUTHOR https://orcid.org/0000-0002-1030-4652 Abolfazl Golestani golsetan@tums.ac.ir 4 Department of biochemistry AUTHOR https://orcid.org/0000-0003-0347-7309 Mohammad Reza Eshraghiyan eshraghianmr@yahoo.com 5 Department of Epidemiology and Biostatistics AUTHOR
ORIGINAL_ARTICLE The Antibacterial and Immunomodulatory Effects of Carbohydrate Fractions of the Seaweed Gracilaria persica Introduction: Red seaweeds are the source of polyanionic polymers that play a critical role in ionic, mechanical, and osmotic functions of the cells. The Gracilaria polysaccharides have numerous biological activities. This research aimed to compare the in vivo and in vitro effects of the various carbohydrate fractions of the seaweed Gracilariopsis persica. Methods: The crude polysaccharide of the G. persica seaweed was extracted using three methods, including soaking in water, hot water extraction, and acid extraction. On the optimal conditions, the seaweed polysaccharides were extracted using HCl 0.1 M 10% (w/v), and the crude carbohydrates were precipitated by ethanol. The extract was fractionated on diethylaminoethyl cellulose (DEAE-C) column using a NaCl gradient. The antimicrobial activity of each fraction was assessed by microdilution broth method against 6 bacteria species, including Staphylococcus aureus, Escherichia coli, Methicillin-resistant Staphylococcus aureus (MRSA), Salmonella typhimurium, Pseudomonas aeruginosa, and Aeromonas hydrophila. Moreover, the obtained fractions were orally administered (100 µg/day) for 7 days to 10 groups of 4 adult NMRY mice. The effects of various fractions were evaluated based on the bactericidal effect of the sera and some immune response indicators, including complement activity and humoral immune response against sheep red blood cells (SRBC). Results: Most of the fractions had direct antibacterial effects; however, oral administration of the fractions neither increased the antibacterial effect of sera nor triggered the complement activity. However, the fractions 1, 2, 5, and 6 significantly induced the humoral immune response against SRBC. Conclusion: The G. persica seaweed has direct antibacterial effects. However, unlike the humoral immune response induction, the carbohydrate fractions have no effects on innate immune responses. http://jommid.pasteur.ac.ir/article-1-168-en.pdf 2019-03-18 57 61 10.29252/JoMMID.6.2.3.57 Gracilaria Mice Anti-bacterial Agents Immunity Mohammad Khosravi m.khosravi@scu.ac.ir 1 Department of Pathobiology, Faculty of Veterinary Medicine, Shahid Chamran University of Ahvaz, Iran AUTHOR https://orcid.org/0000-0001-9510-3464 Darioush Gharibi d.gharibi@scu.ac.ir 2 Department of Pathobiology, Faculty of Veterinary Medicine, Shahid Chamran University of Ahvaz, Iran AUTHOR https://orcid.org/0000-0002-3614-0254 Farnoosh Kaviani f.kaviani89dvm@yahoo.com 3 Student of clinical pathology, Faculty of Veterinary Medicine, Shahid Chamran University of Ahvaz, Iran AUTHOR https://orcid.org/0000-0002-9669-4056 Mehrdad Mohammadidust mmohammadidoust@yahoo.com 4 Aquaculture Research Center, Ahvaz, Iran. AUTHOR https://orcid.org/0000-0002-5530-420x
ORIGINAL_ARTICLE Prevalence of Intestinal Parasitic Infections among Patients Referring to Medical Diagnostic Laboratories, Kashan, Central Iran, 2015-2018 Introduction: Intestinal parasitic infections are among the most common diseases worldwide and are significant indicators of the health status of communities, especially in developing countries. This study aims to determine the prevalence of intestinal parasites infection in patients referring to Kashan diagnostic laboratories from July 2015 to August 2018. Methods: This cross-sectional study was carried out on 6921 patients referring to medical diagnostic laboratories, Kashan, central Iran. Fecal specimens were examined by direct smear and formalin-ether concentration methods. The results together with risk factors including sex, age were recorded and analyzed by descriptive statistics using SPSS 16 software. Results: Out of the 6921 individuals examined, 3636 (52.5%) were male and 3285 (47.5%) were female. Microscopy revealed the prevalence of parasitic infection by 4.96% (4.96 ± 0.5). Totally 5.1% of males and 4.6% of females had intestinal parasite infections. No significant association was seen between sex, seasons, and parasite infections. Rate of infection to intestinal parasites were  Blastocystis spp. (3.06%), Entamoeba coli (0.95%), Giardia intestinalis (0.59%), Iodamoeba butschlii (0.23%), Endolimax nana (0.20%), Entamoeba hartmanni (0.20%), Dientamoeba fragilis (0.14%), Chilomastix mesnili (0.07%), Entamoeba histolytica/Entamoeba dispar (0.05%), Hymenolepis nana (0.01%) was the only intestinal worm that observed in one individual. The results showed that 4.48% of the examined individuals were infected with one parasite, 0.39% with two and 0.08% with 3 or more parasites. Conclusion: The prevalence of intestinal parasites in our study was lower than those from other areas of Iran and other countries, indicating an increase in health status as well as public awareness of infectious diseases. http://jommid.pasteur.ac.ir/article-1-180-en.pdf 2019-03-18 62 66 10.29252/JoMMID.6.2.3.62 Prevalence Intestinal parasites Kashan Iran Shirin Khodabakhsh-Arbat sh93sweet@gmail.com 1 Department of Parasitology,School of Medicine,Kashan University of Medical Sciences,Kashan, Iran AUTHOR https://orcid.org/0000-0003-0106-9205 Hossein Hooshyar hooshyar4@yahoo.com 2 Department of Parasitology,School of Medicine,Kashan University of Medical Sciences,Kashan, Iran AUTHOR https://orcid.org/0000-0002-9607-1182 Hadi Sadeghi rostamkh2002@yahoo.com 3 Department of Parasitology,School of Medicine,Kashan University of Medical Sciences,Kashan, Iran AUTHOR https://orcid.org/0000-0002-1040-0599
ORIGINAL_ARTICLE Design and Validation of a Persian Knowledge, Attitude, and Practice Questionnaire for Rabies (PKAP-Rabies) in the General Population of Iran Introduction: Rabies is a highly fatal disease. However, it is quite preventable. Community awareness about rabies is one of the key components for prevention, which should be assessed and routinely monitored by standard questionnaires. We aimed to develop and validate a Persian knowledge, attitude and practice questionnaire for rabies (PKAP-Rabies) in the general population of Iran. Methods: The questionnaire was developed based on existing literature and conducting focus group discussions with experts in the field. Content, face, and construct validity were checked by gathering the opinion of 10 experts in the field. Test-retest reliability was assessed by re-administrating the questionnaire to the same individuals after a 15-days interval. Results: The questionnaire consisted of 64 items, covering five domains including ‘demographics’ (19 items), knowledge about animal and human rabies (14 and 10 items, respectively), attitude towards rabies prevention in animals (6 items), and practice towards rabies prevention/control (14 items). The questionnaires were mainly filled by young (mean= 28.6, SD= 10.3 years) women (63.3%) with a university-level educational background (36.7%). Most knowledge questions had a proper difficulty level (average difficulty index= 20-80%). Wilcoxon test also showed proper test-retest reliability for this questionnaire (PWilcoxon > 0.05). Conclusions: The PKAP-Rabies questionnaire appeared to be feasible, valid and reliable for assessing KAP towards rabies in the general population of Iran with potential application in future large-scale surveys. Information from such surveys can provide insight into adopting prevention and control measures, and would allow us to evaluate the impact of current and upcoming interventions. http://jommid.pasteur.ac.ir/article-1-184-en.pdf 2019-03-18 67 71 10.29252/JoMMID.6.2.3.67 Rabies Knowledge Attitude Practice Iran Maryam Fazeli m_fazeli@pasteur.ac.ir 1 National Collaborating Center for References and Research on Rabies, Virology Department, Pasteur Institute of Iran, Tehran, Iran AUTHOR https://orcid.org/0000-0003-4048-4778 Mahsa Golahdouz mahsa.ko73@yahoo.com 2 National Collaborating Center for References and Research on Rabies, Virology Department, Pasteur Institute of Iran, Tehran, Iran AUTHOR Rouzbeh Bashar dr.r.bashar@gmail.com 3 National Collaborating Center for References and Research on Rabies, Virology Department, Pasteur Institute of Iran, Tehran, Iran AUTHOR https://orcid.org/0000-0001-5469-4472 Masoumeh Arab Baferani a_masoumeh@yahoo.com 4 National Collaborating Center for References and Research on Rabies, Virology Department, Pasteur Institute of Iran, Tehran, Iran AUTHOR https://orcid.org/0000-0001-5803-2847 Amin Doosti Irani doostiiraniamin@gmail.com 5 Department of Epidemiology, School of Public Health, Hamadan University of Medical Sciences, Hamadan, Iran AUTHOR https://orcid.org/0000-0003-0623-7503 Behzad Pourhossein pourhossein.b@gmail.com 6 Virology Department, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran AUTHOR https://orcid.org/0000-0002-4263-0612 Sana Eybpoosh s_eybpoosh@pasteur.ac.ir 7 Department of Epidemiology and Biostatistics, Research Centre for Emerging and Reemerging infectious diseases, Pasteur Institute of Iran, Tehran, Iran AUTHOR https://orcid.org/0000-0002-2304-8352
ORIGINAL_ARTICLE Antimicrobial Resistance Profiles and Virulence Genes of Pseudomonas aeruginosa Isolates Originated from Hospitalized Patients in Shiraz, Iran Introduction: Multidrug-resistant (MDR) Pseudomonas aeruginosa isolates are among the common cause of Nosocomial infections. In P. aeruginosa infections, several genes, mexA, and mexB are involved in resistance to antibiotics and pslA, pelA and brlR contribute to biofilm formation. This study aims to investigate the prevalence of these genes in P. aeruginosa isolates and to determine their relationship with biofilm formation, antibiotic resistant, pigment production, and source of infection. Methods: We collected 63 specimens out of 90 samples from patients hospitalized in a hospital affiliated to Shiraz University of Medical Sciences. The specimens belonged to 42 men and 21 women and included urine, sputum, wound, skin, blood, body fluid, and central venous blood (CVB). The samples were cultured on solid media and diagnosed according to standard phenotypic characteristics. Disk diffusion method was used to identify the clinical MDR P. aeruginosa isolates, and the genes pslA, pelA, brlR, mexA, and men were detected by PCR detected. Results: about 25.4% of the clinical isolates were MDR, i.e., resistant to three or more antibiotics. The prevalence of the genes in the clinical isolates was as follows: pslA (92.1%), pelA (68.3%), brlR (93.7%), mexA (95.2%) and mexB (50.8%). The highest and lowest prevalence of drug resistance belonged to ceftriaxone and amikacin, respectively. The highest MDR P. aeruginosa isolates originated from wound, urine and sputum specimens. Conclusion: The presence of MDR isolates correlated significantly with the patients’ gender, the origin of specimens, and bacterial pigment production.  In this study, the detected genes did not significantly correlate with the MDR features of the isolates. J Med Microbiol Infec Dis, 2018, 6 (2): 5 pages.     http://jommid.pasteur.ac.ir/article-1-164-en.pdf 2019-03-18 72 76 10.29252/JoMMID.6.2.3.72 Pseudomonas aeruginosa Multidrug resistance Biofilm genes Shiraz Iran. Maryam Motevasel motevaselm10@gmail.com 1 Department of Pathobiology, School of Veterinary Medicine, Shiraz University, Shiraz, Iran AUTHOR https://orcid.org/0000-0002-7983-1629 Masoud Haghkhah mhaghkha@shirazu.ac.ir 2 Department of Pathobiology, School of Veterinary Medicine, Shiraz University, Shiraz, Iran AUTHOR https://orcid.org/0000-0001-7266-4082